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McMaille
(pronounce : MacMy)
Two versions are now available for this new Monte Carlo and grid search powder
pattern indexing program (version 3 recommended) :
Version 3
: Columnar peak shape, simple adjustment of the calculated profile by percentage
of inclusion inside of the "observed" profile. Version 3 is 20 times faster
than the old version 2 (20000 tests per second).
Latest improvements in Version 3.04 :
(if your version is older, download a new one)
- V3.04 : A "two phases mode" can be used in desperate cases. Its purpose
is to try to interpret the data with two phases. It is enabled if Rmax >
0.5. The problem is that a quite large number of cells will be tested so
that the speed is considerably decreased. Waiting for faster computers, it
is suggested to limit that mode to cubic/hexagonal/rhombohedral/tetragonal/orthorhombic.
More than 1000 cells will easily appear and force the run to stop. A list
of couples of cells that may explain together a maximum of peak positions
is provided at the end of the .imp file. Two examples are distributed with
the test files (mixture1 and mixture2). That mode may work or not, of course,
it is more difficult to conclude than in the single phase mode... Going back
to the lab for obtaining a pure sample is the best way ! In V3.04 is also
improved the Monte Carlo "cell refinement".
- Less verbosity in the screen output as well as in the .imp file (you
may get full verbosity again if you wish, the code being a negative wavelength...).
The screen displays only the cells corresponding to the smallest and smallest
Rp, as they come.
- Quite important : V3.03 : Monte Carlo algorithm largely improved
: 4-10 times less MC events are needed (generally) for a same result. Memory
is kept of cell parameters improving the fit, contrarily to version 3.02 in
which all changes were accepted. However some changes not improving the fit
are accepted too, times to times, in order to not being trapped in a false
minima. Black box expert mode shorter as well.
- Added file output (*.mcm) for CRYSFIRE entry.
- Supercells reduced.
- Black box modes (NGRID=3 or 4) allowing to "autoindex" simple cases.
See the corresponding short manual.
- The Rmaxref control parameter (a cell was refined by Monte Carlo if
Rp < Rmaxref) which was previously fixed at 0.5, can be changed by the
user.
- Quite important : A second criterium for selecting cells has
been introduced (the first was that Rp < Rmaxref) : if the expected number
of peaks is explained by a cell proposal, then that cell is "refined" also,
even if Rp > Rmaxref. This produces approximately twice the number of
good solutions for a same number of Monte Carlo events. Then the calculation
time for obtaining a good solution is reduced by a factor 2.
- Dynamical change of Rmax if too much cell proposals are retained (use
negative Rmax in the .dat file for this option).
- Pressing the K keystroke (capital letter - for Kill) will stop the
program a few seconds later, saving the current results.
- New logo and icon.
- Output .prf file for viewing by WINPLOTR (pseudo pattern with Gaussian
peak shape).
- Possibility for individual peak width (use W negative and give triplets
of (2-theta, I, W), instead of (2-theta, I) doublets.
- Output of the M(20) and F(20) classic figures of merit for the "best"
refined cells.
- Elimination of some redundant solutions (test if Volume and cell parameters
do not differ by more than 0.2%).
- Presentation of 2 sorted lists of "best" cells : by increasing Rp,
and by increasing volume.
- No crash if the data file name does not exist, a second chance is
given.
- Cell parameters and zeropoint refinement by using the routine CELREF
from Laugier and Filhol.
- The user may decide for the number of unindexed reflections.
- Min and max values for individual cell parameters can be selected
if the global Pmin is set negative. This allows exploring some dubious parameters
if some are known (two long parameters obtained, one short uncertained, for
instance).
Old version 2
: Gaussian peak shapes, Le Bail fit (1000 tests per second on a processor
Intel Pentium IV, 2.4GHz).
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