Molecular Structures

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This page contains the list of sites with molecular structures. This list contains only the sites which contain data in PDB format. Note that links are subject to changes. If this happens, use Google or some other search engine to find the site. Use the words (or even entire titles) from the middle column as search terms.

DATA	LINK	REFERENCE
Proteins and Nucleic Acids	The Protein Data Bank, http://www.rcsb.org/pdb/	H.M.Berman, J.Westbrook, Z.Feng, G.Gilliland, T.N.Bhat, H.Weissig, I.N.Shindyalov, P.E.Bourne, The Protein Data Bank, Nucleic Acids Research 28, pp. 235-242 (2000).
Hetero Compounds	Hetero-compound Information Centre - Uppsala, http://xray.bmc.uu.se/hicup/	Kleywegt, G.J. and Jones, T.A. (1998). Databases in protein crystallography. Acta Cryst D54, 1119-1131 (CCP4 Proceedings).
Many Small Molecules	Molecular Models from Chemistry at Okanagan University College, http://people.ouc.bc.ca/woodcock/molecule/molecule.html	Prepared by Dr. Dave Woodcock.
Smells Database	Smells Database, ChemConnections Project, College of Chemistry, University of California, Berkeley, http://mc2.cchem.berkeley.edu/Smells/index.html	ChemConnections Project.
Pedagogical PDB's, Vitamins	Computer Based Resources for Chemistry and Biochemistry Students, Department of Chemistry, Georgia State University, http://chemistry.gsu.edu/glactone/	Glactone Project, University System of Georgia.
Small Organic Compounds	Klotho: Biochemical Compounds Declarative Database, biocheminfo.org, http://www.biocheminfo.org/klotho Compound List: http://www.biocheminfo.org/klotho/compound_list.html	Klotho: Biochemical Compounds Declarative Database, Brian H. Dunford-Shore, Waheeda Sulaman, Brian Feng, Francis Fabrizio, Jason Holcomb, William Wise and Toni Kazic.
Vitamins	PDB Files of the Vitamins and Their Cofactor Derivatives, Glactone's CD-ROM of PDB Files, Department of Chemistry, Georgia State University, http://chemistry.gsu.edu/cwcs/MM-CD/workshop02/docs/vitamins.htm	Glactone's CD-ROM of PDB Files.
Sugars	PDB Files of Some Sugars, Glactone's CD-ROM of PDB Files, Department of Chemistry, Georgia State University, http://chemistry.gsu.edu/cwcs/MM-CD/workshop02/docs/sugars.htm	Glactone's CD-ROM of PDB Files.
Lipids	PDB Files of Some Lipids, Glactone's CD-ROM of PDB Files, Department of Chemistry, Georgia State University, http://chemistry.gsu.edu/cwcs/MM-CD/workshop02/docs/lipids.htm	Glactone's CD-ROM of PDB Files.
Flavors	PDB Files of Some Flavors, Glactone's CD-ROM of PDB Files, Department of Chemistry, Georgia State University, http://chemistry.gsu.edu/cwcs/MM-CD/workshop02/docs/flavors.htm	Glactone's CD-ROM of PDB Files.