AddOption(RefObjOpt *opt) | ObjCryst::RefinableObj | [protected] |
AddPar(const RefinablePar &newRefPar) | ObjCryst::RefinableObj | |
AddPar(RefinablePar *newRefPar) | ObjCryst::RefinableObj | |
AddPar(RefinableObj &newRefParList) | ObjCryst::RefinableObj | |
AddRestraint(Restraint *pNewRestraint) | ObjCryst::RefinableObj | |
AddSubRefObj(RefinableObj &) | ObjCryst::RefinableObj | [protected] |
BeginGlobalOptRandomMove() | ObjCryst::RefinableObj | |
BeginOptimization(const bool allowApproximations=false, const bool enableRestraints=false) | ObjCryst::ScatteringData | [virtual] |
CalcGeomStructFactor() const | ObjCryst::ScatteringData | [protected] |
CalcGlobalTemperatureFactor() const | ObjCryst::ScatteringData | [protected] |
CalcLuzzatiFactor() const | ObjCryst::ScatteringData | [protected] |
CalcResonantScattFactor() const | ObjCryst::ScatteringData | [protected, virtual] |
CalcScattFactor() const | ObjCryst::ScatteringData | [protected] |
CalcSinThetaLambda() const | ObjCryst::ScatteringData | [protected, virtual] |
CalcStructFactor() const | ObjCryst::ScatteringData | [protected] |
CalcStructFactVariance() const | ObjCryst::ScatteringData | [protected] |
CalcTemperatureFactor() const | ObjCryst::ScatteringData | [protected] |
ClearParamSet(const unsigned long id) const | ObjCryst::RefinableObj | |
CreateCopy() const=0 | ObjCryst::ScatteringData | [pure virtual] |
CreateParamSet(const string name="") const | ObjCryst::RefinableObj | |
DeRegisterClient(RefinableObj &) const | ObjCryst::RefinableObj | [virtual] |
EliminateExtinctReflections() | ObjCryst::ScatteringData | [protected] |
EndOptimization() | ObjCryst::ScatteringData | [virtual] |
EraseAllParamSet() | ObjCryst::RefinableObj | |
FindPar(const string &name) const | ObjCryst::RefinableObj | [protected] |
FindPar(const REAL *) const | ObjCryst::RefinableObj | [protected] |
FindParamSet(unsigned long id) const | ObjCryst::RefinableObj | [protected] |
FixAllPar() | ObjCryst::RefinableObj | |
GenHKLFullSpace(const REAL maxTheta, const bool unique=false) | ObjCryst::ScatteringData | [virtual] |
GenHKLFullSpace2(const REAL maxsithsl, const bool unique=false) | ObjCryst::ScatteringData | [virtual] |
GetClassName() const | ObjCryst::RefinableObj | [virtual] |
GetClockMaster() const | ObjCryst::RefinableObj | |
GetClockNbReflBelowMaxSinThetaOvLambda() const | ObjCryst::ScatteringData | |
GetClockTheta() const | ObjCryst::ScatteringData | |
GetCrystal() const | ObjCryst::ScatteringData | |
GetCrystal() | ObjCryst::ScatteringData | |
GetFhklCalcImag() const | ObjCryst::ScatteringData | |
GetFhklCalcReal() const | ObjCryst::ScatteringData | |
GetFhklCalcSq() const | ObjCryst::ScatteringData | |
GetGeneGroup(const RefinableObj &obj, CrystVector_uint &groupIndex, unsigned int &firstGroup) const | ObjCryst::RefinableObj | [virtual] |
GetH() const | ObjCryst::ScatteringData | |
GetH2Pi() const | ObjCryst::ScatteringData | |
GetK() const | ObjCryst::ScatteringData | |
GetK2Pi() const | ObjCryst::ScatteringData | |
GetL() const | ObjCryst::ScatteringData | |
GetL2Pi() const | ObjCryst::ScatteringData | |
GetLogLikelihood() const | ObjCryst::RefinableObj | [virtual] |
GetLSQCalc(const unsigned int) const | ObjCryst::RefinableObj | [virtual] |
GetLSQDeriv(const unsigned int, RefinablePar &) | ObjCryst::RefinableObj | [virtual] |
GetLSQObs(const unsigned int) const | ObjCryst::RefinableObj | [virtual] |
GetLSQWeight(const unsigned int) const | ObjCryst::RefinableObj | [virtual] |
GetMaxSinThetaOvLambda() const | ObjCryst::ScatteringData | |
GetName() const | ObjCryst::RefinableObj | [virtual] |
GetNbLSQFunction() const | ObjCryst::RefinableObj | [virtual] |
GetNbOption() const | ObjCryst::RefinableObj | |
GetNbPar() const | ObjCryst::RefinableObj | |
GetNbParNotFixed() const | ObjCryst::RefinableObj | |
GetNbRefl() const | ObjCryst::ScatteringData | |
GetNbReflBelowMaxSinThetaOvLambda() const | ObjCryst::ScatteringData | |
GetOption(const unsigned int i) | ObjCryst::RefinableObj | |
GetOption(const unsigned int i) const | ObjCryst::RefinableObj | |
GetPar(const long i) | ObjCryst::RefinableObj | |
GetPar(const long i) const | ObjCryst::RefinableObj | |
GetPar(const string &name) | ObjCryst::RefinableObj | |
GetPar(const string &name) const | ObjCryst::RefinableObj | |
GetPar(const REAL *) | ObjCryst::RefinableObj | |
GetPar(const REAL *) const | ObjCryst::RefinableObj | |
GetParamSet(const unsigned long setId) const | ObjCryst::RefinableObj | |
GetParamSet(const unsigned long setId) | ObjCryst::RefinableObj | |
GetParamSet_ParNotFixedHumanValue(const unsigned long setId, const long parNumber) const | ObjCryst::RefinableObj | |
GetParamSetName(const unsigned long setId) const | ObjCryst::RefinableObj | |
GetParNotFixed(const long i) | ObjCryst::RefinableObj | |
GetParNotFixed(const long i) const | ObjCryst::RefinableObj | |
GetRadiation() const=0 | ObjCryst::ScatteringData | [pure virtual] |
GetRadiationType() const | ObjCryst::ScatteringData | |
GetReflX() const | ObjCryst::ScatteringData | |
GetReflY() const | ObjCryst::ScatteringData | |
GetReflZ() const | ObjCryst::ScatteringData | |
GetRefParListClock() const | ObjCryst::RefinableObj | |
GetRestraintCost() const | ObjCryst::RefinableObj | [virtual] |
GetSinThetaOverLambda() const | ObjCryst::ScatteringData | |
GetSubObjRegistry() | ObjCryst::RefinableObj | |
GetSubObjRegistry() const | ObjCryst::RefinableObj | |
GetTheta() const | ObjCryst::ScatteringData | |
GetWavelength() const | ObjCryst::ScatteringData | |
GlobalOptRandomMove(const REAL mutationAmplitude, const RefParType *type=gpRefParTypeObjCryst) | ObjCryst::RefinableObj | [virtual] |
IsBeingRefined() const | ObjCryst::RefinableObj | |
IsIgnoringImagScattFact() const | ObjCryst::ScatteringData | |
mClientObjRegistry | ObjCryst::RefinableObj | [mutable, protected] |
mClockFhklCalcVariance (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | [mutable, protected] |
mClockGeomStructFact | ObjCryst::ScatteringData | [mutable, protected] |
mClockGlobalBiso | ObjCryst::ScatteringData | [protected] |
mClockGlobalTemperatureFact | ObjCryst::ScatteringData | [mutable, protected] |
mClockHKL | ObjCryst::ScatteringData | [protected] |
mClockLuzzatiFactor (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | [mutable, protected] |
mClockMaster | ObjCryst::RefinableObj | [protected] |
mClockNbReflUsed | ObjCryst::ScatteringData | [mutable, protected] |
mClockScattFactor | ObjCryst::ScatteringData | [mutable, protected] |
mClockScattFactorResonant | ObjCryst::ScatteringData | [mutable, protected] |
mClockStructFactor | ObjCryst::ScatteringData | [mutable, protected] |
mClockStructFactorSq | ObjCryst::ScatteringData | [mutable, protected] |
mClockThermicFact | ObjCryst::ScatteringData | [mutable, protected] |
mClockTheta | ObjCryst::ScatteringData | [mutable, protected] |
mDeleteRefParInDestructor | ObjCryst::RefinableObj | [protected] |
mExpectedIntensityFactor | ObjCryst::ScatteringData | [protected] |
mFhklCalcImag | ObjCryst::ScatteringData | [mutable, protected] |
mFhklCalcReal | ObjCryst::ScatteringData | [mutable, protected] |
mFhklCalcSq | ObjCryst::ScatteringData | [mutable, protected] |
mFhklCalcVariance | ObjCryst::ScatteringData | [mutable, protected] |
mGlobalBiso | ObjCryst::ScatteringData | [protected] |
mGlobalTemperatureFactor | ObjCryst::ScatteringData | [mutable, protected] |
mH | ObjCryst::ScatteringData | [protected] |
mH2Pi | ObjCryst::ScatteringData | [mutable, protected] |
mIgnoreImagScattFact | ObjCryst::ScatteringData | [protected] |
mIntH | ObjCryst::ScatteringData | [mutable, protected] |
mIntK | ObjCryst::ScatteringData | [mutable, protected] |
mIntL | ObjCryst::ScatteringData | [mutable, protected] |
mIsbeingRefined | ObjCryst::RefinableObj | [protected] |
mK | ObjCryst::ScatteringData | [protected] |
mK2Pi | ObjCryst::ScatteringData | [mutable, protected] |
mL | ObjCryst::ScatteringData | [protected] |
mL2Pi | ObjCryst::ScatteringData | [mutable, protected] |
mLSQDeriv | ObjCryst::RefinableObj | [mutable, protected] |
mMaxSinThetaOvLambda | ObjCryst::ScatteringData | [protected] |
mMultiplicity | ObjCryst::ScatteringData | [protected] |
mName | ObjCryst::RefinableObj | [protected] |
mNbRefl | ObjCryst::ScatteringData | [protected] |
mNbReflUsed | ObjCryst::ScatteringData | [mutable, protected] |
mNbRefParNotFixed | ObjCryst::RefinableObj | [mutable, protected] |
mOptionRegistry | ObjCryst::RefinableObj | [protected] |
mpCrystal | ObjCryst::ScatteringData | [protected] |
mRandomMoveIsDone | ObjCryst::RefinableObj | [protected] |
mRefParListClock | ObjCryst::RefinableObj | [protected] |
mRefparNotFixedIndex | ObjCryst::RefinableObj | [mutable, protected] |
mSinThetaLambda | ObjCryst::ScatteringData | [mutable, protected] |
mSubObjRegistry | ObjCryst::RefinableObj | [protected] |
mTheta | ObjCryst::ScatteringData | [mutable, protected] |
mUseFastLessPreciseFunc | ObjCryst::ScatteringData | [protected] |
mvFprime | ObjCryst::ScatteringData | [mutable, protected] |
mvFsecond | ObjCryst::ScatteringData | [mutable, protected] |
mvImagGeomSF | ObjCryst::ScatteringData | [mutable, protected] |
mvLuzzatiFactor | ObjCryst::ScatteringData | [mutable, protected] |
mvpRefPar | ObjCryst::RefinableObj | [protected] |
mvpRestraint | ObjCryst::RefinableObj | [protected] |
mvpSavedValuesSet | ObjCryst::RefinableObj | [mutable, protected] |
mvRealGeomSF | ObjCryst::ScatteringData | [mutable, protected] |
mvScatteringFactor | ObjCryst::ScatteringData | [mutable, protected] |
mvTemperatureFactor | ObjCryst::ScatteringData | [mutable, protected] |
mX | ObjCryst::ScatteringData | [mutable, protected] |
mY | ObjCryst::ScatteringData | [mutable, protected] |
mZ | ObjCryst::ScatteringData | [mutable, protected] |
operator=(const RefinableObj &old) | ObjCryst::RefinableObj | |
Prepare() | ObjCryst::RefinableObj | [protected, virtual] |
PrepareForRefinement() const | ObjCryst::RefinableObj | |
PrepareHKLarrays() | ObjCryst::ScatteringData | [protected, virtual] |
Print() const (defined in ObjCryst::RefinableObj) | ObjCryst::RefinableObj | [virtual] |
PrintFhklCalc(ostream &os=cout) const | ObjCryst::ScatteringData | [virtual] |
PrintFhklCalcDetail(ostream &os=cout) const | ObjCryst::ScatteringData | [virtual] |
RandomizeConfiguration() | ObjCryst::RefinableObj | [virtual] |
RefinableObj() | ObjCryst::RefinableObj | |
RefinableObj(const bool internalUseOnly) | ObjCryst::RefinableObj | |
RefinableObj(const RefinableObj &old) | ObjCryst::RefinableObj | |
RegisterClient(RefinableObj &) const | ObjCryst::RefinableObj | [virtual] |
RemovePar(RefinablePar *refPar) | ObjCryst::RefinableObj | |
RemoveRestraint(Restraint *pRestraint) | ObjCryst::RefinableObj | |
RemoveSubRefObj(RefinableObj &) | ObjCryst::RefinableObj | [protected] |
ResetParList() | ObjCryst::RefinableObj | |
RestoreParamSet(const unsigned long id) | ObjCryst::RefinableObj | |
SaveParamSet(const unsigned long id) const | ObjCryst::RefinableObj | |
ScatteringData() (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | |
ScatteringData(const ScatteringData &old) (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | |
SetCrystal(Crystal &crystal) | ObjCryst::ScatteringData | [virtual] |
SetDeleteRefParInDestructor(const bool b) | ObjCryst::RefinableObj | |
SetGlobalOptimStep(const RefParType *type, const REAL step) | ObjCryst::RefinableObj | |
SetHKL(const CrystVector_REAL &h, const CrystVector_REAL &k, const CrystVector_REAL &l) | ObjCryst::ScatteringData | [virtual] |
SetIsIgnoringImagScattFact(const bool b) | ObjCryst::ScatteringData | |
SetLimitsAbsolute(const string &parName, const REAL min, const REAL max) | ObjCryst::RefinableObj | |
SetLimitsAbsolute(const RefParType *type, const REAL min, const REAL max) | ObjCryst::RefinableObj | |
SetLimitsProportional(const string &parName, const REAL min, const REAL max) | ObjCryst::RefinableObj | |
SetLimitsProportional(const RefParType *type, const REAL min, const REAL max) | ObjCryst::RefinableObj | |
SetLimitsRelative(const string &parName, const REAL min, const REAL max) | ObjCryst::RefinableObj | |
SetLimitsRelative(const RefParType *type, const REAL min, const REAL max) | ObjCryst::RefinableObj | |
SetMaxSinThetaOvLambda(const REAL max) | ObjCryst::ScatteringData | [virtual] |
SetName(const string &name) | ObjCryst::RefinableObj | [virtual] |
SetParIsFixed(const long parIndex, const bool fix) | ObjCryst::RefinableObj | |
SetParIsFixed(const string &parName, const bool fix) | ObjCryst::RefinableObj | |
SetParIsFixed(const RefParType *type, const bool fix) | ObjCryst::RefinableObj | |
SetParIsUsed(const string &parName, const bool use) | ObjCryst::RefinableObj | |
SetParIsUsed(const RefParType *type, const bool use) | ObjCryst::RefinableObj | |
SortReflectionBySinThetaOverLambda(const REAL maxSTOL=-1.) | ObjCryst::ScatteringData | [protected, virtual] |
TagNewBestConfig() const | ObjCryst::RefinableObj | [virtual] |
UnFixAllPar() | ObjCryst::RefinableObj | |
UpdateDisplay() const | ObjCryst::RefinableObj | [virtual] |
XMLInput(istream &is, const XMLCrystTag &tag) | ObjCryst::RefinableObj | [virtual] |
XMLOutput(ostream &os, int indent=0) const | ObjCryst::RefinableObj | [virtual] |
~RefinableObj() | ObjCryst::RefinableObj | [virtual] |
~ScatteringData() (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | |