AddRefinableObj(RefinableObj &) | ObjCryst::OptimizationObj | |
BuildRecursiveRefObjList() | ObjCryst::OptimizationObj | [protected] |
DisplayReport() | ObjCryst::OptimizationObj | [virtual] |
FixAllPar() | ObjCryst::OptimizationObj | |
GetBestCost() const | ObjCryst::OptimizationObj | |
GetBestCost() | ObjCryst::OptimizationObj | |
GetClassName() const | ObjCryst::MonteCarloObj | [virtual] |
GetFullRefinableObj(const bool rebuild=true) | ObjCryst::OptimizationObj | |
GetLastOptimElapsedTime() const | ObjCryst::OptimizationObj | |
GetLogLikelihood() const | ObjCryst::OptimizationObj | [virtual] |
GetMainTracker() | ObjCryst::OptimizationObj | |
GetMainTracker() const | ObjCryst::OptimizationObj | |
GetName() const | ObjCryst::OptimizationObj | |
GetXMLAutoSaveOption() | ObjCryst::OptimizationObj | |
GetXMLAutoSaveOption() const | ObjCryst::OptimizationObj | |
InitOptions() | ObjCryst::MonteCarloObj | [protected, virtual] |
IsOptimizing() const | ObjCryst::OptimizationObj | |
mAnnealingScheduleMutation | ObjCryst::MonteCarloObj | [protected] |
mAnnealingScheduleTemp | ObjCryst::MonteCarloObj | [protected] |
mBestCost | ObjCryst::OptimizationObj | [protected] |
mBestParSavedSetIndex | ObjCryst::OptimizationObj | [protected] |
mContext | ObjCryst::OptimizationObj | [protected] |
mCurrentCost | ObjCryst::MonteCarloObj | [protected] |
mGlobalOptimType | ObjCryst::MonteCarloObj | [protected] |
mIsOptimizing | ObjCryst::OptimizationObj | [protected] |
mLastOptimTime | ObjCryst::OptimizationObj | [protected] |
mMainTracker | ObjCryst::OptimizationObj | [protected] |
mMinCostRetry | ObjCryst::MonteCarloObj | [protected] |
mMutationAmplitude | ObjCryst::MonteCarloObj | [protected] |
mMutationAmplitudeGamma | ObjCryst::MonteCarloObj | [protected] |
mMutationAmplitudeMax | ObjCryst::MonteCarloObj | [protected] |
mMutationAmplitudeMin | ObjCryst::MonteCarloObj | [protected] |
mName | ObjCryst::OptimizationObj | [protected] |
mNbTrial | ObjCryst::OptimizationObj | [protected] |
mNbTrialRetry | ObjCryst::MonteCarloObj | [protected] |
MonteCarloObj(const string name="") | ObjCryst::MonteCarloObj | |
MonteCarloObj(const bool internalUseOnly) | ObjCryst::MonteCarloObj | |
mRecursiveRefinedObjList | ObjCryst::OptimizationObj | [mutable, protected] |
mRefinedObjList | ObjCryst::OptimizationObj | [protected] |
mRefParList | ObjCryst::OptimizationObj | [mutable, protected] |
mSaveFileName | ObjCryst::OptimizationObj | [protected] |
mSaveTrackedData | ObjCryst::MonteCarloObj | [protected] |
mStopAfterCycle | ObjCryst::OptimizationObj | [protected] |
mTemperature | ObjCryst::MonteCarloObj | [protected] |
mTemperatureGamma | ObjCryst::MonteCarloObj | [protected] |
mTemperatureMax | ObjCryst::MonteCarloObj | [protected] |
mTemperatureMin | ObjCryst::MonteCarloObj | [protected] |
MultiRunOptimize(long &nbCycle, long &nbSteps, const bool silent=false, const REAL finalcost=0, const REAL maxTime=-1) | ObjCryst::MonteCarloObj | [virtual] |
mvContextObjStats | ObjCryst::OptimizationObj | [mutable, protected] |
mvObjWeight | ObjCryst::OptimizationObj | [mutable, protected] |
mvSavedParamSet | ObjCryst::OptimizationObj | [protected] |
mXMLAutoSave | ObjCryst::OptimizationObj | [protected] |
NewConfiguration(const RefParType *type=gpRefParTypeObjCryst) | ObjCryst::MonteCarloObj | [protected, virtual] |
OptimizationObj(const string name="") | ObjCryst::OptimizationObj | |
Optimize(long &nbSteps, const bool silent=false, const REAL finalcost=0, const REAL maxTime=-1) | ObjCryst::MonteCarloObj | [virtual] |
PrepareRefParList() | ObjCryst::OptimizationObj | [protected] |
Print() const | ObjCryst::OptimizationObj | [virtual] |
RandomizeStartingConfig() | ObjCryst::OptimizationObj | [virtual] |
RestoreBestConfiguration() | ObjCryst::OptimizationObj | |
RunParallelTempering(long &nbSteps, const bool silent=false, const REAL finalcost=0, const REAL maxTime=-1) | ObjCryst::MonteCarloObj | |
RunSimulatedAnnealing(long &nbSteps, const bool silent=false, const REAL finalcost=0, const REAL maxTime=-1) | ObjCryst::MonteCarloObj | |
SetAlgorithmParallTempering(const AnnealingSchedule scheduleTemp, const REAL tMax, const REAL tMin, const AnnealingSchedule scheduleMutation=ANNEALING_CONSTANT, const REAL mutMax=16., const REAL mutMin=.125) | ObjCryst::MonteCarloObj | |
SetAlgorithmSimulAnnealing(const AnnealingSchedule scheduleTemp, const REAL tMax, const REAL tMin, const AnnealingSchedule scheduleMutation=ANNEALING_CONSTANT, const REAL mutMax=16., const REAL mutMin=.125, const long nbTrialRetry=0, const REAL minCostRetry=0.) | ObjCryst::MonteCarloObj | |
SetLimitsAbsolute(const string &parName, const REAL min, const REAL max) | ObjCryst::OptimizationObj | |
SetLimitsAbsolute(const RefParType *type, const REAL min, const REAL max) | ObjCryst::OptimizationObj | |
SetLimitsRelative(const string &parName, const REAL min, const REAL max) | ObjCryst::OptimizationObj | |
SetLimitsRelative(const RefParType *type, const REAL min, const REAL max) | ObjCryst::OptimizationObj | |
SetName(const string &) | ObjCryst::OptimizationObj | |
SetParIsFixed(const string &parName, const bool fix) | ObjCryst::OptimizationObj | |
SetParIsFixed(const RefParType *type, const bool fix) | ObjCryst::OptimizationObj | |
SetParIsUsed(const string &parName, const bool use) | ObjCryst::OptimizationObj | |
SetParIsUsed(const RefParType *type, const bool use) | ObjCryst::OptimizationObj | |
StopAfterCycle() | ObjCryst::OptimizationObj | |
TagNewBestConfig() | ObjCryst::OptimizationObj | |
UnFixAllPar() | ObjCryst::OptimizationObj | |
UpdateDisplay() | ObjCryst::OptimizationObj | [protected, virtual] |
XMLInput(istream &is, const XMLCrystTag &tag) | ObjCryst::MonteCarloObj | [virtual] |
XMLOutput(ostream &os, int indent=0) const | ObjCryst::MonteCarloObj | [virtual] |
~MonteCarloObj() | ObjCryst::MonteCarloObj | [virtual] |
~OptimizationObj() | ObjCryst::OptimizationObj | [virtual] |